YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|38674607
Protein type:	Globular with Signal Peptide
Type Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSVAARSGP FAPVLSATSE PPVLDAKRPF LCRESLSGRA VRRQVVASVS LNVPASVRYS  60
   61 HTDVRVPDFS DYRRTEVLDG TKSSKESSEA RKGFSYLITA TTTVGVAYAA KNVVSQFVSS 120
  121 MSASADVLAM SKIEIKLSDI PEGKNMAFKW RGKPLFVRHR TKKEIDQEAA VEVSQLRDPQ 180
  181 HDLERVKKPE WVILIGVCTH LGCVPIANAG DFGGYYCPCH GSHYDASGRI RKGPAPLNLE 240
  241 VPSYEFTSDD MVIVG

Type	Start	End	Confidence
Signal Peptide	1	19	0.50
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	255	0.92