YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|33358376
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTKRKAYVR PMTSTWWKKL PFYRFYMLRE GTAVPAVWFS IELIIGLFAL KHGAESWMGF  60
   61 VAFLQNPVVV ILNIIALAAA LLHTKTWFEL APKAANIIVK DEKMGPEPII KGLWAVTVVA 120
  121 TVVILFVALF W

Type	Start	End	Confidence
Cytoplasmic	1	25	0.93
Transmembrane Helix	26	50	0.79
Non-Cytoplasmic	51	62	0.78
Transmembrane Helix	63	87	0.82
Cytoplasmic	88	108	0.93
Transmembrane Helix	109	130	0.92
Non-Cytoplasmic	131	131	0.97