YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50557122, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPPPPSVFQ GQQGPSNFEK FKMGLLMGTA VGCCTGLMFG GYAIFTHGAG PNGVMKTLGQ  60
   61 YVAGSAATFG LFMSVGSIIR SEDRPRSPAE WHHAARTGRI VSRDAFNQL

Type	Start	End	Confidence
Cytoplasmic	1	23	0.94
Transmembrane Helix	24	45	0.93
Non-Cytoplasmic	46	57	0.85
Transmembrane Helix	58	79	0.91
Cytoplasmic	80	109	0.96