YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49651291
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFSTTLLLA SLTLLVDAQA AAAPAAGAAA PAAAPAAPAA NNPGAGAAPA NGANIAPAPA  60
   61 PAPAAPAPAA PAGANAPAAN PAAPAANAPG ANAGAAIVNG DGAAAAPAAP GAAGAATPSS 120
  121 SSTLAAGAKA TPSSSSTLAA GAVATPSTSS TTLPVGAAAA VPAASSTTTG TSSTTNADGL 180
  181 GDVPGLASTS TTAVPPAANI APHGGLGGGP GGVIPTTVVS TPVWVTGTLP NGQKATTESL 240
  241 YTQKFTSMYE TTGTWSSGSV GLGSLSSKGT IGVERPPMYI TVATAATSK

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	289	0.99