YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49650761, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSRFARIGS MGIRPVAAAR ATFVTSARAA QAAPSWENIK DIRLDPKVHV DEVYEPIVNP  60
   61 ADRYLQHVSD LHQYAKYIMA ALPKYIQGFS VWKDELTLHV APSAVIPVTT FLRDNTSTQY 120
  121 KSIIDITAVD YPSRENRFEV VYNFLSVRHN SRIRLKTYAT EVTPVPSITC LYEGANWFER 180
  181 EAYDMYGVFF EGHPDLRRIM TDYGFEGHPL RKDFPLTGYT EVRWDEEKRR VVYEPLELTQ 240
  241 AFRNFSAGST AWEPVGPGRD DRPDSFKLPT PKPEEKEGDK K

Type	Start	End	Confidence
Signal Peptide	1	32	0.95
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	281	0.99