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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49650630, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFTTLLSMA SVAMSAAVTV EIHSTVLETV FETASETIIS DAATPEPSPT VRYVTILPKP  60
   61 FPAFNGVALS GTVHNKRDTV ETSVDCNLGL ASASAAALRE QSSAGTSSAA YTATLTSGSN 120
  121 LSSETHTIEV SSSTSSIPEP ATASIETEPN PSLIPLFIPV HQEDSTTDTT TDTHNMGLGT 180
  181 KIRDMVNNVG PVAAADLSKP NQAPNDRTIF QSRNNHGPNI GSMFLLEKWL TPGMFPDSAK 240
  241 GDAELDAVTA LVAEQGAGGA QKKFEDHWNT WITDDDFSYL QSVGANAIRV PMGYWTINGG 300
  301 AFTQGTPFQQ YQSVYQNAWS IFKTNILDKA RAANIAVLID LHAVPGGANG DAHSGTSSGK 360
  361 VEFWDSRSDQ KIAIDALQWV AKDVLSYDNV LGIEVVNEAV YDASTSKEGS YYLRALEAIR 420
  421 QVNPDVPVYI SDGWAPTEWN EWVQEQNQKL SAGQNTGFVV DSHVYKAFSE QDKGNSPQQN 480
  481 IANVPAYLNV GKAQADSIVG EFSCVFSEET WAKAGGEDRE QLAIKYGQVQ IESFNQNARA 540
  541 GWFFWTYKFQ YGDGGDWGFK PMTQKGALPT FSNGGSNKDP KAGIKEAATK ATEEHSAYWD 600
  601 QHQGNYEHWR YADGYVSGWQ DAAAFYEFHG STIGRINAWQ DARRAQHIAA KGNSGAIWEW 660
  661 DQGFDAGIQG LLNYMRS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle