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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50554203, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFVVAWQPPA CKVNIHRIIQ TGTDPKSNLL NITSRATCKM SFLGGTLNSR PDEARDSPLA  60
   61 DREPLGEQNN SFLNRQSTPK TKPVNLSFIN KAPIEYVTQS EMERVFETGN QVYEDGKNVF 120
  121 PSIDHDHIFS VGDQRVTIDA DETESDISLS ASEHLDKYPY IRDESCIQNL NAHLGELPPS 180
  181 SPDTGNSSSE SFRDLLTSPS VQQNQSRIEN RQRLPSSNRQ RTSNQQQQPP SNTQLPKKSL 240
  241 FKSATETTRK LFPDMRRSVV NNEASKRSEP SMAMIPSPQK PPSQQYHINP NVPKVDMSFM 300
  301 KSKRRPTSVE FSPIKQYHEI PGRRRDGRGY GNSFQPRGSR YSPQFDVSYD DSFEQRYEMY 360
  361 NGRGRDDENR GSRVNGTRGN GFEGNRGHDY GTRGIFGGGD RTNGIRSQSN HGGRDHHSED 420
  421 DWEDEYADYD INTPNHNINT PCRTPKPKSR DHDNSSRESK DNHASSSSSA QSGAAAALNL 480
  481 PILLSIWLQL AYNAIIMAVV SYFVWTFYST VKRDVDMKVD EYSADILQEM AMCSKDYLAN 540
  541 NCMPGKRVPA LETMCNAWER CMNRDPKIVG RARVSAETFA EIINGFLRPI SFKSMVFVIF 600
  601 LLAGSLFVCN FGFGTYRGPL YQQVKENEKK QDKEKEKEKE KRKSRDRGDY ERVYDSPSFY 660
  661 VSPRYYRQRG YRRRY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle