YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49650273
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFVSAKTFIV ARSTFMWSLA YFLWTDPTVI IDNMYVNIVG QAMQLPPLKL ENAEPLLGLV  60
   61 AYLLTMVGVS DVAPLNGPYL EYFYSIMPLR VITLFAIIAY CAYGNSIYVS NSMVFSIVFL 120
  121 DLLFSFFTYL ALREERNEYL KKKILAVQAT QKDQEENNLV S

Type	Start	End	Confidence
Cytoplasmic	1	7	0.94
Transmembrane Helix	8	30	0.72
Non-Cytoplasmic	31	54	0.81
Transmembrane Helix	55	75	0.85
Cytoplasmic	76	85	0.67
Transmembrane Helix	86	104	0.91
Non-Cytoplasmic	105	112	0.65
Transmembrane Helix	113	132	0.94
Cytoplasmic	133	161	0.93