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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49649354, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVIFENTPM ADYLQQADNP GMADWGLDDE YDFDSSDEDL LQSYEGRRSY EKDPNVEENL  60
   61 RRIDEEDEYD TDTNTENVSS PEQQPSQHPQ SHPQNTQRKH RRFASTSAIQ PLHSANENLM 120
  121 KRERFQLLLA GALRQSLPLV ENNRFLEKFR YIVVTSQLLS EQPPVSSKTP NFPDDKDLLP 180
  181 ETTWATSGGC VVVVVGLFSW AVRKKAIFEG KARAMASFVA TLCLVIFMYA HSRRRLLRII 240
  241 RIKAVQSARQ FVLSSQGFDA AVHKSLGVIH EVEFLSKGFS FPQKTVEGTD LDVRLCKQLR 300
  301 AALSASLYLS ISSLTRSIRK MLNHCHKLDL EKYLDIYEVD VMDLSLFVED DGPIPEHDFT 360
  361 ASSPVEALRN MVDVPEADFY GSKGANHSHK NLKFYHYKFH LLRRVMLCCL LSMTASGTDG 420
  421 SEYTQWKLVS GELSRSEKLL RQLDESLVDT IYGLDHDAKL LSHSRSDSLF GKVIDSRKGR 480
  481 RLSSFNLLSE PSSAASEPSK EVQQHLKQLS RLSSTLRQIE GRMQIAREGS MSHIESASAD 540
  541 ELLTNYRTLG DDIQSLASIW QGGMSSLEAK LKNPSTSRAE KTLSFIEKQR HLSDATVDTL 600
  601 ASPLLQQLAS LGSPVHNNDY STVSQATTLA EFEDDVHGPA AKQSALSNTY RALCGDSTPV 660
  661 SSPPMSPTML EDENGIPIQY SQFGKRRSFH QRDMSLTTIL EGIANKDKGK GLGIDTSGTV 720
  721 HEQREKRIAR MKEEREREVD NRAAANRRGS VMLELKTVLE NR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle