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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PLPL_YARLI
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.24
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKLKFRWNK PDDGPRVKRQ KSQQLTLDSP EGSETSSRPG GGYDNDRDVN GTFKRPWDIT  60
   61 KIPGYNQTYV NEASLDKFAA YLKEEEVPVE SSTPVSSEEM LPLEPVQKEY ITSKHDWTPV 120
  121 FSVLKNNNSV NKRKMSHTAL KSDFKHYLDM YDKEEKRRRG KSKKDKEGSE GDKTKTKEPK 180
  181 ELVRKSVFSS ILGVFSIFSK TKDGRKLKRD EIGEGIGFWL MRWPALFFIG MWLLFLTTIY 240
  241 ASVRVLVAGY ENILTWRGKR AKLRKVLRGA RTYEQWVQAA QDLDVELGNA EWRENPKFGY 300
  301 YDHVTISKLT KMVRKLRLQD QAEDLSNILQ GCIKNNFAGT ESSTLYSQTY YGTKKVVEQW 360
  361 NEELGKAVTY VLESPKIDDE EKRDLFRLYS KNFGKSALCL SGGGCFAYLH FGIVKAMLDQ 420
  421 DLLPQIISGT SGGALIAALA CTRTDEELRQ ILVPELAYKI TACWEPFPKW VFRWWRTGAR 480
  481 FDSVDWARRS CWFTLGDMTF KEAYQRTGRI LNVSTVPADP HSPVILCNYI TSPDCLIWSA 540
  541 LLASAAVPGI LNPVMLMNKT KSGDIVPFSF GSKWKDGSLR TDIPVDALNT YFNVNCSIVS 600
  601 QVNPHIALFF YAPRGTVGRP VSHRKGKGWR GGFLGAALES MIKLEIRKWL KFIKAVELLP 660
  661 RFVDQDWTNV WLQRFSGSVT LWPKIHLADF WHILGDPWPE KMEDLLYRGQ QCAFPKLLFL 720
  721 KHRMNIEKRI RNGRQATRHR KRKLEETDVC DLVRKTFSES DPDSDVKHSF VFPALMAPRS 780
  781 AGTDISSSNS DYDHEPQWEM DEGDSFLTAD EEYPTTIL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle