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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49648647, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYGSELSQR SVPEWKSHNL DYDEIKQLIK RATTDDAKDP TTETHVLEAL KNEFEHISLF  60
   61 VRSKTGEIDR RIIHCQKTID HISEDDRVKE ETYAAQGKSY AHHLNSKRRQ TRLYKLRTEI 120
  121 NRVTVEVQNL ARFIGVQRTG FRKLLKKYAK WSGKQTLHQS FLPTLDGMYS FTQQDFTPVF 180
  181 LELSFIFETL RQAKYQSINT YIQTALGDRD GSDPAQFDTE MVTLATNMPN AGAVAMWVHP 240
  241 DHITELKVML LKTMSFVDSP KTLRQKGEVL ATSVDTNQGP STPTLSRRPS LTLTRALSDQ 300
  301 HVTEHSHAVY LDDPRKLISI QTNTEPGQIR WVDVLPKDSL NSESDSPHQT MHLSEAGPET 360
  361 DPDYVLCAPV GGFRHFAASR VSRDLADAIY HSNLEDAKWE IDNLNGSGKL AVEWVAKRNA 420
  421 VPLSQASMHR SRFLFEDSLS MSIGERRKSV SIFEQGTPSG STLDNPNESS KVWATLDEGI 480
  481 TVKRAGFHAH FSKDGPKSAS FPYAVLEIKW KGLKPQWIED IEKSHLVHVV EGFSIYSHSI 540
  541 ALFHAQALSK PPHWMKTLNK VDLLKLPPKK VREEPTTASG NTAQLQLSRD SNTHPVSGSI 600
  601 LLNSSPGSIP SLTDELSDTS QETTEPPKVR YWNEFDNPED GEDDSGIFIY TNGDEQGLTH 660
  661 DFLTEGHVNK LIRISDNLAD KVHKTASKVR KLMGIKPKRS SLSDEESASD NEEESLLRGR 720
  721 LYSPRLNPNY NDYDYGSAAS SVSEQVTDIY GEDEFAGYGQ QQQLVADRRD RVLSLFYSTC 780
  781 FLLSTLIVGV LCGIIAGEDM NQVSGGAIAF SFLAFMFSTA LGIVGLTLYL MRTSTPSLWH 840
  841 QSFVFVVMML NVCFGVGGFA WLLAEIV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle