YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	COQ1_YARLI
Protein type:	Globular with Signal Peptide
Type Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRVGRIGTK TLASSSLRFV AGARPKSTLT EAVLETTGLL KTTPQNPEWS GAVKQASRLV  60
   61 ETDTPIRDPF SIVSQEMSTL ANNIGSLIGS GHPTLNKVAT YYFQSEGKHV RPLIVLLLSR 120
  121 ALSAIPESER DRGTFDASDV TENVGELNPE PSINDPLSPI EILHGINPDI VLNPLSRPSD 180
  181 PLPYESNGIL PKQRRLAEIV EMIHTASLLH DDVIDNSATR RGSPTGNVAF GNKMAILAGD 240
  241 FLLGRASVAI ARLRNAEVIE LLSTTIANLV EGEFMQLKNT IVDNSEIANK ATFEYYIHKT 300
  301 YLKTASLMSK SCRAAAVLSG ARNPIVDASY KFGKNLGLCF QVVDDMLDYS EGESHLGKPA 360
  361 GADLKLGLAT APVLFAWEKY PELGDMIKRK FDGPGDVERA RFLVQQADGL SRTRELAQKY 420
  421 CDEAVANLDL LPYSESREAL RNLTMKMMNR SK

Type	Start	End	Confidence
Signal Peptide	1	22	0.72
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	452	0.99