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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49647568
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFGEQLKQS LIKDYYYCYI DYDGLKEALY KGIAKGAEWD DEKEKNFLQQ LEGELDKVFT  60
   61 FQKVKAAEIA RRIKESEVEV EDVVRRLDSA NPPVEQDFLD LQDLLSDIIA DVHDLAQYTR 120
  121 LNYTGFQKII KKHDKHTKWP VKPIFSARLN ARPFFKDNYD ALVVKLSKLY DLVRTRGNPV 180
  181 KGDSAAGGGQ QNFVRQTTKY WVHPDNITEL KLVILKHLPV LVFNASKEFE TEDSAITSIY 240
  241 YDNRPLDLYK GRLEKTEGAE AIRLRWYGGM KSDQIFVERK THREDWTGEK SVKARFNLKE 300
  301 KHVNDFMAGD YTVPQAFEKM RKDGKKSLKE IESLEALARE VQYRVIKDKM RPVVRSFYNR 360
  361 TAFQLPGDAR VRISLDTELT MVREDNFDGQ NRTNGNWRRM DIGVDWPFNQ LPEKDVLRFP 420
  421 YAVLEVKLQT QLGQEPPAWV RELVSSHLVE AVPKFSKFIH GCATLLPDMV DLIPFWLPQM 480
  481 DVDIRKPATT FQGIERAQVA SGSSVSGSDE LDDLDDLDDN EGNYLDEEER AGGADGHVSF 540
  541 NGNGAVASSS NGTASSSAAA NTSPNATENT PLLGSGSGHT GGDNALLKSL KNASDWFKDT 600
  601 FIAGKDDFSK VPPGTVFDTR VVVPAGKRIS VPVRVEPKVY FANERTFLSW IEIGILLGAI 660
  661 AGTLLNYGDR LAIQAAFGFF ISAVITILYS IGMYLWRVYN IRRKRAIRYD DQIGPTAICI 720
  721 VLALAIGANF VARLTH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle