YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49647131, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LLQFPGSQTS CFPPLPPSHT NSVSTAPLLQ SAPGKRIALP TRVEPKVFFA NERTFLSWLN  60
   61 FTVILGGLAV GLLNFGDRVG RISAGMFTLV AMATMGYALV TYHWRAAAIR KRGSGPYDDR 120
  121 FGPTMLCIFL LAAVVVNFVL RMAQ

Type	Start	End	Confidence
Cytoplasmic	1	54	0.92
Transmembrane Helix	55	75	0.93
Non-Cytoplasmic	76	81	0.79
Transmembrane Helix	82	104	0.89
Cytoplasmic	105	120	0.88
Transmembrane Helix	121	140	0.94
Non-Cytoplasmic	141	144	0.63