YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49647044
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDKRRADLC VPYVHVVDKQ NDAQSFITTS LPMAAMFLRN KLMSWTALFT AITAFMNEPL  60
   61 IKPTQSDGAS QPAWLSVLVS LVGLFTCYMD LAFPSQGRKL AAQHAASSTA SAASSTASAA 120
  121 SATVASVASK ATGVAADALD KLFKKAA

Type	Start	End	Confidence
Cytoplasmic	1	41	0.92
Transmembrane Helix	42	61	0.86
Non-Cytoplasmic	62	71	0.84
Transmembrane Helix	72	92	0.92
Cytoplasmic	93	147	0.72