YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50547381, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.78
Topology Confidence:	0.24
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSCTDLLLVI VAVFFPPIPV AIRRGVCSAD FFINVALCCL GFLPGLIHAF YIISKYPGDE  60
   61 HGCRHGGYAP VNGSEQTFYG SSDLERAGPS SSHQQQPQHQ APPSGEYYTS LDNKKDNTNR 120
  121 PPPYSG

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.24
Transmembrane Helix	6	22	0.49
Cytoplasmic	23	30	0.33
Transmembrane Helix	31	52	0.72
Non-Cytoplasmic	53	126	0.63