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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50547231, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTLMWSAEQ SAAAAAGSHL QSAAEWPDRV LTNLIRYMSP RDVVTFGSTC KRIRQVSLRD  60
   61 DLWQSRLEAM DLWDDAEAKR KKNDEFHQHE EQELDKEEEE DMTGAGQKKE EDTLVDLLDL 120
  121 SPTKPVTATS TPYMPPADLS NQPNPLTPFD GLESTYGKAL ETYSSVYRNL APFYYDMVQS 180
  181 GAFQEPLLFK LYDQPEHQAR ALVNLKRLSY SLGDNEFEDE NRDQLASIAE TFENAALREF 240
  241 ELGIDEGDFT PDSRVKRYAQ VLKQLGATES CVELFVHKRA IDVPHSPAIL GDKGINMTAL 300
  301 QNHLDLVSKT IAQQMEAIDT VFGLEIDNVS YLFAKIVLED AVIDTINHVL EAAREQETVY 360
  361 YLDAVPDIYA KLLTITDTLP SSINGHQDKY KGALKRLLIS QYEFHVDQFM QLELDSFETY 420
  421 ANDLVDSWDK ETHDKEIATE HYYLSNVTKE KDKRDFLSSF KDVLMMPINV IGVGSSKDAS 480
  481 RSGTPNPNAN GSSSKSGTPN PGASRSGTPN PDQSSADGHH VSSPPPELET NLPTTELDAK 540
  541 AAIMNDRLQG INSLFNLELA LNITKAGKAS LERIKRFHAA GGQLAKDSKE QCERVFVSLI 600
  601 DILGKRHIGG GFDKALGRLD SYKPHNLGFL DEKKSKKGKK EEVKEESLEE KKKKEMEKKG 660
  661 GLEPLVVFAE LVNIGDLIQQ MIHVFFEEEL AQKKFIDRND FVSPSVQAKK KFEKQLDEYV 720
  721 ARGLNQGIDV LSDQMDFLFV TTQLGSDFNP LPNMEPNMGP TECAKGLVDL LSVHMKILSG 780
  781 STEKTVLDVF QQELGMRFFA SICKHLKRKT ISVDGAITVI SDLNYYYSFV LGLKQRPLNQ 840
  841 PFAALKEVGQ MYLIDTKDAK ALGKLLSDMN RFKGVFQPEE IYEFAHSRAD WVLVKREVEK 900
  901 AMYGLGVDCV IS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle