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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49646900, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFIVDYAKRA YRKLRHFRIT FIVVHYFIII GSAIFGTFLF YPAKTTKYID ALFQCACAAT  60
   61 QAGLNTVDLN SLKLWQQMVL YCISMWTNPI VIHSGVVFMR LHWFEKSFKD IKNQSKLQSK 120
  121 LRRTATTLAR QDTLENGLFQ RPPLRHQNPG VAGLNSNINN DSSDETPHKE GHNNDNPNLN 180
  181 KEITFGNLPQ PKRTHSVEPE DMYRSINLLS HEHPEGQSDS DDDGPALVIR GPRDRPDRDD 240
  241 DEEDSPEIER APRAISFSTQ EHPRAQKSAL EQFKEEMRES QRQLDAEHAI DEGESSDATQ 300
  301 PTSIKREDMY YRQHPDSDSS EGDTVKKVRS NVTVHRPSPE DDDFAGTQPM NRRAFTLDGD 360
  361 NTEEKNHEGA FAHFKRSLTF DRFLSNRRRG SDAASSSGAT SNADLNKTMS SNYLSWSPTV 420
  421 GRNSAFVDLT EEQKEELGGI EYRALKVLSK VLVAYFVGFH LMCAIMLLPW AIYMPKYRDY 480
  481 VYSCGVTPTW WAFFTAQSTF NDVGFTLTPD SMGSYQEAIY VLLTMSFFIV IGNTGFPVLL 540
  541 RFIIWIMFKL SPRDSSLKEC TGFLLDHPRR CFTMLFPSTA TWWLFATLVI LNSVDLVFFI 600
  601 ILDFNAPAVT EMRPGYRVVS GLFQAFSTRT AGFTSVSIAE LHPSIQVSYM IMMYIAILPI 660
  661 AISIRRTNVY EEQSLGIYGG GDEESEYDQA PTADEEAENE ENDPEHLYKG KKKKHPSYVT 720
  721 AHLRAQLGYD LWYIFLGLFI ICICEGTKIK DVTDLGFTGF TVLFEVVSAY GTVGMSMGYD 780
  781 DVNTSLSGKF STISKLIIIA MMIRGRHRGL PYSVDRAIIL PSDEMHRKDD AVTRSHLRRG 840
  841 RTMSANSNEL TETMGLPYPM RSHTMMSSGP GAGGNESYPL RGSSHSRQTS NVSDIGPRDL 900
  901 DPIVPSSPMP SVDEDYLKRM EKREQEQEDN KLRGELSDNK KKLHKDEQGI EMDSYFPELK 960
  961 GPGGLDLADD 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle