YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49646728
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRTIRKPAW AAAAAVAAAG AGAVALSVPA QAQEELHKKH KFTVPPVAAE PPSRAAQLEK  60
   61 MKTEEFDLVV VGGGATGSGI ALDAVTRGLK VALVERDDFS CGTSSRSTKL IHGGVRYLEK 120
  121 AVWNLDYNQY ELVKEALHER KVFLDIAPHL TFALPIMIPV YTWWQLPYFW MGVKCYDLLA 180
  181 GRQNLESSYM LSRSRALDAF PMLSDDKLKG AIVYYDGSQN DSRMNVSLIM TAVEKGATIL 240
  241 NHCEVTELTK GANGQLNGVV AKDTDGNAGS FNIKAKCVVN ATGPFTDSLR QMDDKNTKEI 300
  301 CAPSSGVHII LPGYYSPKKM GLLDPATSDG RVIFFLPWQG NTLAGTTDQP TKITANPIPS 360
  361 EEDIDFILNE VRHYVEGKVD VRREDVLAAW SGIRPLVRDP HAKNTESLVR NHLITYSESG 420
  421 LVTIAGGKWT TYRQMAEETV DACIAKFGLK PEISAKAVTR DVKLIGAKDW TPLTYIDLIQ 480
  481 QEDLDPEVAK HLSENYGSRA FTVASLAEMP TPEPGVIPQS TLTKGKRILY PYPYLDAECK 540
  541 YSMKYEYATT AIDFLARRTR LAFLNAAAAY EALPEVIEIM AKELQWDEAR KEQEFNTGVE 600
  601 YLYSMGLTPK DK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle