YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49646438, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYYPPYTTMK KEDYLPNLVD IESPLSDEEL YVLSQQYNNE GDFVSVQTRF NYAWGLIKSR  60
   61 KVEDQQLGVQ ILAQVYKDTP SRRRECLYYL AIGSYKLGEY TDARKYCDLL LQIEPDDPQS 120
  121 AKLRQIIEDK LAKEGMIGIA IVGGVIAVGA AVLGAVLSQK KR

Type	Start	End	Confidence
Cytoplasmic	1	134	0.65
Transmembrane Helix	135	157	0.92
Non-Cytoplasmic	158	162	0.61