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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50545769, gi|...
Protein type: Transmembrane
Type Confidence: 0.89
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQYQRNSSLR RFVESDQFTL FRCLSYLERY AGDIGIHFYL CQKLLSFPRD EIEFILPQLV  60
   61 QLLITVETES MALEDIILDL SNVSAHCALL TFWQLQAHLT DLGDDPESFG FQVSRRVYNK 120
  121 LQYILFNIGE PPNSRIRENP MPAMVLASAI MGAIGMPQMA AAVGPIALSQ GRKQRSYVFQ 180
  181 IAPKLTRSRS TVEADRDALL QRKWRTISQS GVALPSKREK HQHEHFRDAP KATPYKNSSF 240
  241 SAPDLQNAYH SAPDLRPSNE WDGTRTPVSL EFDDAPGFES EEPRDTSPDD IEERAKDDQR 300
  301 KILRSNYFRC ETQFMSALQQ ISARLLQVPK QARHAALKAE LTLLNQELPA EVDIPLLVPS 360
  361 DTMRKNPTHH RIVRVPPAES AVLNSAERVP FLILIEYLED DMTFDPECAK NKEVLEHADK 420
  421 KKYIFDLTVN HKKSSHARTP SLGRYHDEDA ASIKSNRSAT SIANSLVGST IAELEELGIA 480
  481 EDDELPAEDA DIGDISVISM DEETQAERVK QSVLNTLSHL QESMPSPKLH DVANSPYQSS 540
  541 PRTSDLSFAS SYKFEKAPED PVNHLELPDV ASVATQMRTA AIMLTQLDSS TGSKLSKDEI 600
  601 ASIKARIIDN MQVMEETTLD DRDLSLSKGA AGERKLENDL KTGGMMKSSD PSHAKLGEDW 660
  661 ESKKARIRSK SPYGHLPNWQ LASVIAKTGN DLRQEAFACQ LIQAMKRIWD DAETGVWVKE 720
  721 MKILITSDTS GLIETINNGL SIHSIKKALE TSNVVQTTAA TQTTTKYVPT LTEYWKQTFG 780
  781 DEDSDRYQNS LNAFVRSLAA YSIICYILQI KDRHNGNILL DTDGHIMHID FGFMLSNSPG 840
  841 GVGLEAAPFK LTYEYVELMG GMTSPHFELY RQLMKDAFKN LRKQAESIIL LVDMMLQDSA 900
  901 LPCFQLGPAT TQYLRQRFQL QLSDSDLDHF VDTSLIQKSV GNIYTRIYDH FQLYTQGIYS 960
  961 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle