YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49645937, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNHKMFGTI PQPPGGIVGT VNDAAPVPPA NPTKGSYHWT FERILVVGLI PMTVLPFATG  60
   61 SISPVLDATL GATLLIHSQL GFESCITDYI PKRVYGSIHN YAMYLLYGGT VVGLYGLYKL 120
  121 ETEDVGLTGT IKKIWNA

Type	Start	End	Confidence
Cytoplasmic	1	43	0.80
Transmembrane Helix	44	66	0.74
Non-Cytoplasmic	67	100	0.65
Transmembrane Helix	101	118	0.70
Cytoplasmic	119	137	0.54