YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ATPI_PHYPA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHTAAQFSIS TLNNLYEISS VEVGQHFYWQ IGSFEVHAQV LITSWIVIAI LLSLAVLATR  60
   61 DLQTIPTSGQ NFVEYVLEFI RDLTRTQIGE EEYRPWVPFI GTMFLFIFVS NWSGALLPWR 120
  121 VLELPHGELA APTNDINTTV ALALLTSVAY FYAGLHKRGL NYFGKYIQPT PVLLPINILE 180
  181 DFTKPLSLSF RLFGNILADE LVVAVLISLV PLVVPIPMMF LGLFTSAIQA LIFATLAAAY 240
  241 IGESMEGHH

Type	Start	End	Confidence
Non-Cytoplasmic	1	35	0.70
Transmembrane Helix	36	58	0.89
Cytoplasmic	59	94	0.75
Transmembrane Helix	95	116	0.89
Non-Cytoplasmic	117	135	0.68
Transmembrane Helix	136	155	0.87
Cytoplasmic	156	191	0.76
Transmembrane Helix	192	214	0.81
Non-Cytoplasmic	215	219	0.55
Transmembrane Helix	220	242	0.88
Cytoplasmic	243	249	0.72