YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|34535715
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKWKALFTAA ILQAQLPITE AQSFGLLDPK LCYLLDGILF IYGVILTALF LRVKFSRSAD  60
   61 APAYQQGQNQ LYNELNLGRR EEYDVLDKRR GRDPEMGGKP QRRKNPQEGL YNVSRGDLTF 120
  121 DLGKLEEGLE EGSRGRAGGR AGGGLQRKGW RKGWRRAPEE GLEEGLEEGS GGRAGGRAGG 180
  181 GLRRKGWRKG WRRAPEEGLE EGLEEGSGGR AGGRAGGGLR RRAGGRAGGG LRRKGWRKGW 240
  241 RRAPEEGLEE GLEEGSGGRA GGRAGGGLRR KGWRKGWRRA PEEGLEEGFG GRAGGRAGGG 300
  301 LQRKAVAPHS VVFVCPDLPF LD

Type	Start	End	Confidence
Signal Peptide	1	21	0.98
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	322	0.98