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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50346158, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIPAGKESR TGALQTRAQK GRVRRAVRIS SLVAQEVLSL GADVLPEYKL QAPRIHRWTI  60
   61 LHYSPFKAVW DWLILLLVIY TAVFTPYSAA FLLKETEDGS QAPDCGYACQ PLAVVDLLVD 120
  121 IMFIVDILIN FRTTYVNANE EVVSHPGRIA VHYFKGWFLI DMVAAIPFDL LIFGSGSEEL 180
  181 IGLLKTARLL RLVRVARKLD RYSEYGAAVL FLLMCTFALI AHWLACIWYA IGNMEQPHMD 240
  241 SHIGWLHNLG DQIGKPYNSS GLGGPSIKDK YVTALYFTFS SLTSVGFGNV SPNTNSEKIF 300
  301 SICVMLIGSL MYASIFGNVS AIIQRLYSGT ARYHTQMLRV REFIRFHQIP NPLRQRLEEY 360
  361 FQHAWSYTNG IDMNAVLKGF PECLQADICL HLNRSLLQHC KPFRGATKGC LRALAMKFKT 420
  421 THAPPGDTLV HAGDLLTALY FISRGSIEIL RGDVVVAILG KNDIFGEPLN LYARPGKSNG 480
  481 DVRALTYCDL HKIHRDDLLE VLDMYPEFSD HFWSSLEITF NLRDTNMIPG SPSSAELESG 540
  541 FNRQRKRKLS FRRRTDKDTE QPGEVSALGQ GPARVGPGPS CRGQPGGPWG ESPSSGPSSP 600
  601 ESSEDEGPGR SSSPLRLVPF SSPRPPGDSP GGEPLTEDGE KSSDTCNPLS GAFSGVSNIF 660
  661 SFWGDSRGRQ YQELPRCPAP APSLLNIPLS SPGRRSRGDV ESRLDALQRQ LNRLETRLSA 720
  721 DMATVLQLLQ RQMTLVPPAY SAVTTPGPGP TSTSPLLPVG PVPTLTLDSL SQVSQFVAFE 780
  781 ELPAGAPELP QDGPTRRLSL PGQLGALTSQ PLHRHGSDPG S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle