YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49657824, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQKPLWYRW ARVGVVGFSI IATGSLLFKY TVPTDEQLIA KFSPEIRAEY ERNREIRQKE  60
   61 QQELMKIARE TAASDDPIWK TGRIKSPFEK DGRNTDPKLV DIEKYNRERG DEFKKLEVER 120
  121 AQQELREAEE LVSQKKGWFS RK

Type	Start	End	Confidence
Cytoplasmic	1	9	0.76
Transmembrane Helix	10	30	0.84
Non-Cytoplasmic	31	142	0.91