YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50426753, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKFEITPAL RDIIEKSEIP AELANNLLSN AYISHENLVL FYKDFKPTPT LIALIKSTKH  60
   61 YTPNLNVSNK STPKSKEFIK SMEQLRLKNK EEEYQRLIRP KQEFNTLYDN GLEEIITPAQ 120
  121 AHKELKSQLT TIVNILISVG SVVYAIWYWT DSSMKLQDGY RILLCLFFGI LVLVAEVVVY 180
  181 MSYLNKIEEA KVKERNKLEV KKLVRTLE

Type	Start	End	Confidence
Cytoplasmic	1	128	0.96
Transmembrane Helix	129	149	0.92
Non-Cytoplasmic	150	159	0.88
Transmembrane Helix	160	184	0.88
Cytoplasmic	185	208	0.95