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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15795149
Protein type: Transmembrane
Type Confidence: 0.60
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSAALETME EVQPPVTPPI EPNGKRSEAS LLDICEKVLS LDGSTCDEAL KLFTETKRIL  60
   61 SASMSNIGSG TREEVERFWF AFILYSVKRL SVRKEADGLS VSGDNEFNLC QILRALKLNI 120
  121 VDFFKELPQF VVKAGSVLGE LYGADWENRL QAKEVQANFV HLSLLSKYYK RGFREFFLTY 180
  181 DANAEKNSAN SSTYLLDSYR FGWLLFLALR NHAFSRFKDL VTCSNGVVSI LAILIIHVPC 240
  241 RFRNFSIQDS SRFVKKGDKG VDLVASLCKI YDASEDELRI VIDKANNLVE TILKKKPSPA 300
  301 SECQTDKLDN IDPDGLTYFE DLLEETSIST SLITLEKDYY DGKGELDERV FINEEDSLLG 360
  361 SGSLSAGAVN ITGVKRKIDA LSSPARTFIS PLSPHKSPAA KTNGISGATK LAATPVSTAM 420
  421 TTAKWLRTVI SPLLPKPSPG LEHFLKSCDR DITNDVTRRA HIILEAIFPN SSLGAQCGGG 480
  481 SLQAVDLMDD IWAEQRRLEA CKLYYRVLEA MCKAEAQILH ANNLNSLLTN ERFHRCMLAC 540
  541 SAELVLATHK TITMLFPAVL ERTGITAFDL SKVIESFIRH EDSLPRELRR HLNSLEERLL 600
  601 ESMVWEKGSS MYNSLIVARP SLALEINQLG LLAEPMPSLD AIAALINFSD GANHASSVQK 660
  661 HETCPGQNGG IRSPKRLCTD YRSILVERNS FTSPVKDRLL ALGNVKSKML PPPLQSAFAS 720
  721 PTRPNPGGGG ETCAETGINI FFTKINKLAA VRINGMVERL QLSQQIRESV YCFFQHVLAQ 780
  781 RTSLLFSRHI DQIILCCFYG VAKISQMSLT FREIIYNYRK QPQCKPLVFR SVYVDALQCR 840
  841 RQGRIGPDHV DIITFYNEIF IPAVKPLLVE LGPVRNDRAV EANNKPEGQC PGSPKVSVFP 900
  901 SVPDMSPKKV SAVHNVYVSP LRGSKMDALI SHSTKSYYAC VGESTHAYQS PSKDLSAINN 960
  961 RLNNSSSNRK RTLNFDAEAG MVSDSMVANS LNLQNQNQNQ NGSDASSSGG AAPLKTEPTD1020
 1021 S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle