YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|8978351
Protein type:	Transmembrane
Type Confidence:	0.84
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSPRVMERV HCMVYVVVLS AIAATVTAYP YSSHQTPQYN SPVHKHESSY SPKKYSPYYS  60
   61 ASPLPPLQYR RQGPKYTPHP KPYLFNSPPP PYYSPSPKED YKSPPPPYVY NSPPPPYYSP 120
  121 SPKVDYKSPP PPYVYNSPPP PYYSPSPKVE YKSPPPPYVY NSPPPPYYSL SPKVDYKSPP 180
  181 PPYVYNSPPP PYYSPSPKVD YKFSPPPYVY NSPSPPYYSP SPKVDYKSPP PPYVYNSPPP 240
  241 PYFSPSPKVD YKSPPPPYVY SSPPPPPYYS PSPEVSYKSP PPPPYYSPSL EVSYKSPPPL 300
  301 FVYNFPPPPP FYSPSPKVSY KSPPAPYVSK TPNY

Type	Start	End	Confidence
Cytoplasmic	1	10	0.80
Transmembrane Helix	11	31	0.80
Non-Cytoplasmic	32	334	0.99