YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50425275, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFFVELWES VFTPGTTPAL IKATHASFIM LIISLLSLIY LTRSIHFINL LVIALMLYGS  60
   61 VIWFINELNQ AKLKDNSALE KEDGSVEIEG AKNETDEKPV EAKSTGAFKD MSKPIPVKKR 120
  121 KA

Type	Start	End	Confidence
Cytoplasmic	1	18	0.50
Transmembrane Helix	19	41	0.87
Non-Cytoplasmic	42	44	0.45
Transmembrane Helix	45	66	0.88
Cytoplasmic	67	122	0.52