YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49656707
Protein type:	Transmembrane
Type Confidence:	0.76
Topology Confidence:	0.35
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPKVIREDL VVPYKHVPAK ARSEASGMVA QSLPMAAMFM KNKLLSWTSL FLAIQSYLND  60
   61 PINKQEDSES QQQPPLLKIL FAIIAVCTCY IDLIFPKSGP ASKVESLAQT ASATASAVIS 120
  121 SATGSN

Type	Start	End	Confidence
Cytoplasmic	1	43	0.53
Transmembrane Helix	44	58	0.35
Non-Cytoplasmic	59	75	0.75
Transmembrane Helix	76	95	0.67
Cytoplasmic	96	126	0.43