YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50424799, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.86
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNILSVFNP PPSRDIPDEP CLPCTAIQSL MSFAGGLYLN LNSLFKDLKG KINVHKNPIW  60
   61 WQNSVKSLGI LLIGLGAYRA GEAGLMVWNR KRN

Type	Start	End	Confidence
Cytoplasmic	1	20	0.58
Transmembrane Helix	21	39	0.55
Non-Cytoplasmic	40	66	0.62
Transmembrane Helix	67	88	0.64
Cytoplasmic	89	93	0.53