YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|8809615
Protein type:	Globular with Signal Peptide
Type Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESRHFATAL VFLASKGFVD ILYWVYRFQA SSMAFCTKLG GHWKQGVNVP VSSMLGSLRY  60
   61 MSTKLYIGGL SPGTDEHSLK DAFSSFNGVT EARVMTNKVT GRSRGYGFVN FISEDSANSA 120
  121 ISAMNGQELN GFNISVNVAK DWPSLPLSLD ESIEEAEKKE NKMMSRSVWK DPFVDAFLMK 180
  181 KKNAALNRKI WSRRSTILPE YVDSAVRIYN GKTHVRCKIT EGKVGHKFGE FAFTRKVKKH 240
  241 AKAK

Type	Start	End	Confidence
Signal Peptide	1	17	0.52
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	244	0.93