YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|3164142, gi\|2...
Protein type:	Transmembrane
Type Confidence:	0.82
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ETNIRVVLYS IFSLIFLIIS FKFLKPKKQN LPPSPPGWLP IIGHLRLLKP PIHRTLRSFS  60
   61 ETLDHNDGGG VMSLRLGSRL VYVVSSHKVA AEECFGKNDV VLANRPQVII GKHVGYNNAN 120
  121 MIAAPYGDHW RNLRRLCTIE IFSTHRLNCF LYVRTDEVRR LISRLSRLAG TKKTVVELKP 180
  181 MLMDLTFNNI MRMMTGKRYY GEETTDEEEA KRVRKLVADV GANTSSGNAV DYVPILRLFS 240
  241 SYENRVKKLG EETDKFLQGL IDDKRGQQET GTTMIDHLLV LQKSDIEYYT DQIIKGIILI 300
  301 MVIAGTNTSA VTLEWALSNL LNHPDVISKA RDEIDNRVGL DRLIEEADLS ELPYLKNIVL 360
  361 ETLRLHPATP LLVPHMASED CKIGSYDMPR GTTLLVNAWA IHRDPNTWDD PDSFKPERFE 420
  421 KEEEAQKLLA FGLGRRACPG SGLAQRIVGL ALGSLIQCFE WERVGNVEVD MKEGVGNTVP 480
  481 KAIPLKAICK ARPFLHKIIS

Type	Start	End	Confidence
Cytoplasmic	1	5	0.67
Transmembrane Helix	6	24	0.77
Non-Cytoplasmic	25	500	0.91