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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49655350
Protein type: Globular with Signal Peptide
Type Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKIFQTKLA KTALAAAAGV GGTIVYLDFI RPPVVSDLNN SYKPLRKELA TPPSRESLLN  60
   61 KLETTPKFDV IVVGGGATGT GTAVDAATRG LNVCLLEKSD FASGTSSKST KMAHGGVRYL 120
  121 EKAIFQLSKA QLDLVIEALN ERGNMLRTAP HLCSVLPIMI PVYKWWQVPY FFVGCKMYDW 180
  181 FAGHQNLRSS TVFSREMTSA IAPMMDDSNL KATCVYHDGT FNDARMNATL AITAIDQGAT 240
  241 VLNYMEVKQL VKKDDKITGV LAVDRETGKE YNINATATVN ATGPFADKLL EMDKDPQGLP 300
  301 PKIDQPPRMV VPSSGVHVVL PEYYCPRDMG LLDPSTSDGR VMFFLPWQGK VLAGTTDTPL 360
  361 KSVPENPIPT EEDIQDILQE LQKYIVFPVN RTDVLSAWSG IRPLVRDPST IPEDEQPGSG 420
  421 STQGLVRSHF ISQSPSGLLT ISGGKWTTYR EMAQETVDTL VKNYDFDGKN NALLPCQTNK 480
  481 IILAGGEDYS KNYSARLIHE YRIPLKLAKH LSHNYGSRAS LILELYHQSD YNKLPITLAA 540
  541 NKSFEPSEDK ESEENILSYQ SFDEPFTIAE LKYSLKYEYA RTPVDFLARR TRLAFLNARE 600
  601 ALTAVDGVCA IMEHELKWDE ETTKKMKFEA NDYIGKMGIS PKRFDVEDFI VQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle