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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GUX6_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRLKTSLWV LLLALVSIQL NGSFGSESSK VAYVTLLYGD EFLLGVRVLG KSIRDTGSTK  60
   61 DMVALVSDGV SDYSKKLLKA DGWKVEKISL LANPNQVHPT RFWGVYTKLK IFNMTDYKKV 120
  121 VYLDADTIVV KNIEDLFKCS KFCANLKHSE RLNSGVMVVE PSEALFNDMM RKVKTLSSYT 180
  181 GGDQGFLNSY YPDFPNARVF DPSVTPEVLK TRPVPAMERL STLYNADVGL YMLANKWMVD 240
  241 DSKLHVIHYT LGPLKPWDWW TAWLVKPVDA WHSIRVKLEE TLPGTGGGSN QHDELVVKFL 300
  301 FLLPLCALLF CIYRSIQGRE GSLCWSSFSN QIRYLYYKVR SNGTLGYGGV STMSPSYQPH 360
  361 SGNAQSKVPQ HLGAVSVVVC FTAVLLSLGI SFAIVPRQIM PWTGLVLVYE WTFTIFFLLF 420
  421 GVFLLFVHQH GKRIAIQSES SSLDDSAKVH QRAGGSCDVT TLYYGLGMAF LAIAAVSLPY 480
  481 ILGITALFTR LGLMVGLAII LAAFMTYASE HLAVRWFLKG LEDRRDTTRS NSLCFLC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle