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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|26452571
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSQPPVNES TPSTALSNFG ELVPFYSSYL WNRLASLLPT SKPIFLGKIS NLYRQTVSRK  60
   61 RSISFPLPLP SDFPSSSTIT SNVSADTARI HGVLEEIMAD VLSNLHDIQK SLDFWRSRAE 120
  121 GSNARKAYFM IFERGPTAFV NESTKFVSKS LSEGSAMQHL CQSSSSHMTE RMRVLVELRS 180
  181 ALASFIAQLY VELDKRGEDL VKIPEKALPS LLAVINGLFS NLEGSFSHLH AVRECDSSVD 240
  241 GSYPMPLVFD RLPEVNEEGS QWTDCELTDA INLVHKNLEK LNSYLSVMVG KHRKPRRMTL 300
  301 YWVRYTCGAV GLSVFSIWLL RHSSLMGSSD IENWVHDAKE ATMSFFSDHV EQPLLSIRDE 360
  361 LFDTFRKRHK GVMETEEVQL TQDSLHRMLR NFCEQATREK VPDNASDQEM LEVVMNRYEK 420
  421 ELVHPIHNLL SGELARGLLI QVQKLKLDIE TAMLELDQIL RANEINFAIL AALPAFFLSI 480
  481 VMLTVLRTWL KKDSKAQGRG RIARIHRRLL VVEIEKRIMQ YQSYIEQGRD KDAETVFGLL 540
  541 IYSLERLYRV VEKPARATDE WDLVKQDLIE LGRPQQQTSY KLTVTQRLVT VYDCLLPTLK 600
  601 RQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle