YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50421819, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYDNGLAVG LGVGIPSAVI VLFCLIMWYR NERKQSREDR MENEIDLGLR DDQLFNQFEE  60
   61 ELHKKRGERN KSSLTQEEAG AEAHAEKTYQ TSLSNGSSST TNFLDRKVIA THQKTPSSYD 120
  121 FYESVIPILP PNAYYNTSTQ SPASSNNNVP TTDKVANGST ISPPRIPNDN FASSNESIVA 180
  181 SPTIASNGPD KSLDTLAKQL TGPSYFEKLP SRAATVSLKQ RNQIISNNSS SDILTNSFPS 240
  241 TKNSQAQESA SEIQLGFYSK VPKSSTHSNL ADIANGNQMD SADEIAEPFE DTNEHSGISP 300
  301 FSIRKNDSQD TYKPDVVIE

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.71
Transmembrane Helix	7	29	0.93
Cytoplasmic	30	319	0.74