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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GAUTE_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLHISPSMR SITISSSNEF IDLMKIKVAA RHISYRTLFH TILILAFLLP FVFILTAVVT  60
   61 LEGVNKCSSI DCLGRRIGPR LLGRVDDSER LARDFYKILN EVSTQEIPDG LKLPNSFSQL 120
  121 VSDMKNNHYD AKTFALVLRA MMEKFERDMR ESKFAELMNK HFAASSIPKG IHCLSLRLTD 180
  181 EYSSNAHARR QLPSPEFLPV LSDNAYHHFI LSTDNILAAS VVVSSAVQSS SKPEKIVFHI 240
  241 ITDKKTYAGM HSWFALNSVA PAIVEVKGVH QFDWLTRENV PVLEAVESHN GVRDYYHGNH 300
  301 VAGANLTETT PRTFASKLQS RSPKYISLLN HLRIYIPELF PNLDKVVFLD DDIVVQGDLT 360
  361 PLWDVDLGGK VNGAVETCRG EDEWVMSKRL RNYFNFSHPL IAKHLDPEEC AWAYGMNIFD 420
  421 LQAWRKTNIR ETYHSWLREN LKSNLTMWKL GTLPPALIAF KGHVHIIDSS WHMLGLGYQS 480
  481 KTNIENVKKA AVIHYNGQSK PWLEIGFEHL RPFWTKYVNY SNDFIKNCHI LE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle