YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49654834, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSSRSNARI IRFAVFALIL IGCGFILSRG SYYNADANPG TNLQAKPASD GSISREGDVS  60
   61 GGNGGGNVQA ELQMPNQNVP AAAKPKAEGG ANKKDKVKAT FVSLARNSDL NSLLGSIRQI 120
  121 EDRFNHKFNY DWVFLNDQPF SDEFKEVTSA VVSGTTKYGL IPEEQWSFPS WIDQEKAALT 180
  181 REQMKEKGII YGDSKSYRHM CRYESGFFWR HELMMDYDYY WRVEPDVKIY CDIDYDVFKW 240
  241 MSDNNKAYGF TISLPEYKET IPTLWDVTKK FIKENPQHVA KDNLMEWISN DNGETYNGCH 300
  301 FWSNFEIASL KLWRSEAYTA YFDTLDKNGG FFYERWGDAP IHSIAAALFL QKDQVHFFDD 360
  361 VGYYHVPFHN CPVSKETRLK NKCVCNPDED FTWKGYSCTA KFYTIKNLQR PKGWENFT

Type	Start	End	Confidence
Signal Peptide	1	30	0.72
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	418	0.99