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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50420567, gi|...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIYFRAIRPL QCSLLRVNRG LCTRGIFSTP YPNYTGKLAF QNIILPQIRH YSKLNQDGNE  60
   61 NNISEEYKKH VADNKTSRNE FLGESESTSG KTDPQRKANI DKATHEVKPV TREQLLSKAT 120
  121 NFFSRMRIRL KWMLKKSNRP FNTDDYSAVF SWLVMGNVLL FFLATTTFFS LVIFTINTVF 180
  181 AQEFVARKMG EFITKNSNLT VTFESAVVPG WSDGRISFRK CFVSRRPKLS TKFTKGSQAE 240
  241 AYAASVHGSN DTPEDEVYDD GNYTQYDLTI EEVNISLSFN KWVNGTGMVE NLEIKGLRGV 300
  301 VDRGHVHWDL DDDATNYKNV YQPGDFEINE FKMEDVLFKL IQPSGFRHFD VAIYNCELSK 360
  361 LRKHWLFYDF LNANIMSGSY DNALFTVHKK QRLDDFNKDH SKDEMSDTWK RITRLRVDSL 420
  421 EIDHLNTGLE GPFGWITSGK VDMIGDVMVP QDNKDLNMSE LVTIIAESIK KEANRYRNPE 480
  481 VPKKSLHPDH HMRLTSSDYT DILKYFVLDL TIRLNNVRAT VPFQTPELSY INYALIRPIV 540
  541 AYINSKNTFI EVKSRIVKNI ADFSGSWTVY DSLLMDDISE EVYDNFVDYV ADEEARVARM 600
  601 KKVGFWSIQL LFQVIVFGLG ALT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle