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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50420451, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDQAQLEFDQ GGAFQVRQQI LKQHQLQQQQ QTKTRIKQQK LRITFLGYIL VLFCFAILQF  60
   61 IGVGFFSLGF LLSRQVLPNI SECTGRQDDS CMQPAKFDKA VVLVIDALRF DFAIPVEGSS 120
  121 KYYHNNFPIL HELTQSEPDN AILLKFMSDP PTTTLQRLKG LTTGSLPTFI DAGSNFNGDA 180
  181 IDEDNWILQL HKNNKSVAFM GDDTWTALFT EYINPQLNFP YDSLNVWDLH TVDNGVIDHL 240
  241 YPLLQKENST KWDVLIGHFL GVDHVGHRYG PNHYSMKEKL NQMNDVISDV IEKLDDDTLL 300
  301 VVMGDHGMDS TGNHGGDSLD ELESTLFMYS KQKKFHVNKK SPDFYDTSDM GRHYRSVNQI 360
  361 DLVPTMSLLL GLPIPYNNLG FPIDEAFGND KDLTLASFKT IHQIQNFRDS TPNLASNLEI 420
  421 TEKFEKFVQD YAKFGNNKKY LTKLIEFSKS YQYDSLEQCK SLWARFDLTL ICIGIAIIFF 480
  481 SLTFITTYSR SIPSVRVLTM SFEFIGSIIA MLLVGLVSSF SIFIVLKPAG FDMKKCLLIG 540
  541 AALGIIIGFW APIMDRFSIS WLWHQLRDFF SYNFNSWSFL GILFVVFHCL IFASNSFVVW 600
  601 EDKMVLFFLL TFGACCLYSC MINSKHSKVE KILGILHSLT FIILSRLTSM INLCREEQHP 660
  661 YCKATFKTSW WSIILLHLCS FALPLVIKSF YKLSNSYHSA APLWIGTGVK TLMVMNAIYW 720
  721 TFEYIENQDF YLTSNFNISG PLLKSVKIAI ARIVLFITLV LANFSWSRGP LCVKIDTQSV 780
  781 EILDDSDSDD LLSNLLPQPH QPPARSNTIL GYGNVYGSSY FLLVLNFAVA IMLVTKPLGA 840
  841 ISLNMLLIQI LSLLELYNIL GLRKNLIAPI IFGLLGYQHF FSTGHQATIP SIQWELGFMT 900
  901 TETILFPFTH LNIVLNTFGL FLIICLSIPL IALWRIPPSN RPITVLSQII TDITTLITYQ 960
  961 TFISLSSLVF AAHFRRHLMV WKIFAPRFML SSLLLIVLNL TLVFITLWFG AGKVVTQINR1020
 1021 IFGK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle