YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49654348, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.82
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPIPSEPEN ISLIHPKVLL LSAGVTTSLF LSYKFYKRYV RRIRNYLDLT PEILDRQTPL  60
   61 YGRVTRVGDG DNFRFYHTPG GILFGWGWLR HVPTKRQELK DETLMVRLCG VDAPERAHWG 120
  121 KPAQPYSEEA LAWLKNYIFG RNVVVTPYLI DQYKRLVGRA QVWKWTGKKD ISAEMLRNGL 180
  181 GVVYEGKIGA EFGDNESWYR KLEARAKWLR RGLWSLGSSM TTPGEFKKVH YRGDS

Type	Start	End	Confidence
Non-Cytoplasmic	1	12	0.89
Transmembrane Helix	13	36	0.70
Cytoplasmic	37	235	0.65