YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	UGHY_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSLYLIVFI VISLVKASKS DDGFCSAPSI VESDEKTNPI YWKATNPTLS PSHLQDLPGF  60
   61 TRSVYKRDHA LITPESHVYS PLPDWTNTLG AYLITPATGS HFVMYLAKMK EMSSSGLPPQ 120
  121 DIERLIFVVE GAVTLTNTSS SSKKLTVDSY AYLPPNFHHS LDCVESATLV VFERRYEYLG 180
  181 SHTTELIVGS TDKQPLLETP GEVFELRKLL PMSVAYDFNI HTMDFQPGEF LNVKEVHYNQ 240
  241 HGLLLLEGQG IYRLGDNWYP VQAGDVIWMA PFVPQWYAAL GKTRSRYLLY KDVNRNPL

Type	Start	End	Confidence
Signal Peptide	1	17	0.98
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	298	0.99