YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FK161_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMAMEISLP FVGSSMALSA GKSRNSVSRI SRVGFSSVSA VHVPRRMFMQ LSGFGSVLTL  60
   61 LDFPSLAAPV PQMKEPEVIR TLKLPSGVRY QEIIEGEGRE AHEGDLVELN YVCRRANGYF 120
  121 VHSTVDQFSG ESSPVKLILD ENDVIEGLKE VLVGMKAGGK RRALIPPSVG YINETLKPIP 180
  181 EEFGPRRSLL SHANEPLVFE IQLLKVL

Type	Start	End	Confidence
Signal Peptide	1	19	0.64
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	207	0.94