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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49653940
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALEQSLAAL SLATVSSESA VSTKTLVFKP KTAKSATPVP VVVFALQSTQ TPSPVIAKAA  60
   61 GVKEPRLAKD DLVTEFFTVS AKEVSIANLH KDLAGKIKLV VDENITKASD DTVLELSTAS 120
  121 AKASISAKVL NEYIASTGIE VVSVDFSAEQ AAAPAADTSK KDALKKEKQA AKLEDAKLIG 180
  181 ITVDKAKDFS SWYSQIVTKG EMLDYYDVSG CYILRPNSYS VWETIQEWFN LRIKKMGVQN 240
  241 SYFPMFVSSR VLEKEKDHIE GFAPEVAWVT RAGNSELDEH IAIRPTSETV MYPYYAKWIR 300
  301 SHRDLPLKLN QWNSVVRWEF KHPQPFLRTR EFLWQEGHTA HLTKESAAEE VEQILDLYAG 360
  361 IYEELLAVPV VKGKKTENEK FAGGDYTTTC EGFIAETGRG IQGATSHHLG TNFSKMFNIS 420
  421 VENPEGADKP RVHAFQNSWG LSTRVIGVMV MTHSDNKGLV LPPRVAQTQV VVIPVGLTAK 480
  481 TPDEQRKAIN DGAANIEHIL KQTDVRVTGD YRDNYSPGWK FSNWELKGTP LRLEFGPKDL 540
  541 ASEQVTAVRR DNSQKYSVKL NELEKRIPEI LQEMQVGLLE KARKDFDEHR VMVHEWKDFV 600
  601 PTLNAKNVIV SPWCGDGDCE DDIKDSSAKK DDGEEEEVDE KSPSMGAKSL CIPFDQPELK 660
  661 SGQKCVKCDR PAVTYCMFGR SY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle