YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49653814
Protein type:	Transmembrane
Type Confidence:	0.87
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMHPFFSAAR NSTRVASMRS MFTRNFVSKT QFVNTRVMSN GSMMPKMKLL VGSVGTFYLV  60
   61 NKLQSKSTIF NDAAFAGNRG FSTQQPVVPE QKVISSRFGG KLDYQELTIG SITGLFLGIL 120
  121 AGKLSSAIVF LTLSGYLLTQ FLENKGIISI PWRQFVNIGS ERIDVKRLVL NQPSFKISFV 180
  181 LTFLIAAFNV

Type	Start	End	Confidence
Cytoplasmic	1	106	0.63
Transmembrane Helix	107	138	0.59
Non-Cytoplasmic	139	190	0.57