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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NUP54_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFGTPSSSPS FGTPSSTPAF GTSSPAFGTP SATPAFGTPS NPSFSSGGFG SSLFSSPFSS  60
   61 QQPQQQQQQQ QQQQPSSLFQ QQPSSNFGFQ SPFNNTAQQQ QQTPFPNAQL TTQMAPVAPI 120
  121 PYSLADRDVQ AIIEAYKEDP TNPKYAFQHL LFSVTEPQYR VKPAAVSDIM WAEAMSKLEG 180
  181 MDSTERERLW PQLVQGFKDL SQRLKLQDEV LVSDRDRIKT TQSNVKMLQR HLQASTFPSI 240
  241 ERLRQKEQSL QRRMLRVMRI IEGLEGKGFR LPLTKGEAEL SEKLTAITRQ VKGPGAELSR 300
  301 RVQSLQTISR AQANSIAAGS SLYLPGSTKI DEQSLIDMQE VLQQETEAIG RLGNVLKRDM 360
  361 RDMEIMVAED TEMALDS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle