YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50418623, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNIIELLSVV ISIVLSMSSS GNKSSQAGGK EQKLLDHLLS LPEDQLASIR GNPGKVLEAI  60
   61 DNYPASFMTI GKNKGKIIVD KMKEVKPMVM IELGCYVGYS AILFANELPK EQGTKYYSFE 120
  121 ANPDFANIAL QIIDLAGLSH KVQIIVGNAA HTLGGFRDTF KRQGLSYSSL DFIFIDHEKS 180
  181 LYVPDLRVLE SLNLIAPGTV IAADNIIMPG APEYVEYVQS SPEEKRDFNY RVENVNGKEF 240
  241 LGRWNIIYKT ETIPAITSKG HKDAVEITEC VEYLNG

Type	Start	End	Confidence
Signal Peptide	1	21	0.97
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	276	0.99