YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30692042, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMNRILLFMI LAFVSSLSEV EPISFKITNR CRNTIWPGLL SGANSAPLPT TGFRLSRGKS  60
   61 KTVAIPESWS GRLWARTLCS QDRSSGSFVC LTGDCGSGKV ECSGSGAKPP ATLAEFTLNG 120
  121 TGGLDFYDVS LVDGYNLPML ILPKKIVIGG CGATGCLVDL NGACPRDLKL VTRGNGNGVA 180
  181 CRSACEAFGD PRYCCSDAYA TPDTCQPSVY SLFFKHACPR AYSYAYDDKT STYTCATGAD 240
  241 YFIIFCPPPY TSEKLLGSRK DGATLPLVNK SMIHLPHPHS S

Type	Start	End	Confidence
Signal Peptide	1	18	0.99
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	281	0.99